publications

Peer-reviewed publications in environmental microbiology, plant genetics, and forest ecology by Kathryn Caruso.

Environmental Microbiology

Characterizing the genomic potential and metabolic capabilities of cold-adapted bacteria from icy and cold environments.

Seven genome sequences of bacterial environmental isolates from the western coast of the Greenland Ice Sheet
Markus Dieser, Heidi J. Smith, Kathryn Caruso, Christine M. Foreman
Published
2026
In Plain Language
We sequenced the complete genomes of seven bacteria collected from the surface of the Greenland Ice Sheet. These organisms survive in an environment of extreme cold, UV radiation, and limited nutrients. Publishing their genomes makes them available for researchers worldwide to study how life adapts to extreme conditions — and whether these microbes could be useful in biotechnology, including my own work on biocementation in permafrost.
genomics extremophiles Greenland Ice Sheet bioinformatics

Plant Genetics

Using genetic and reproductive data to understand the population structure of rare Appalachian plant species — informing how we protect fragmented populations.

Reproductive and genetic patterns in Virginia spiraea (Spiraea virginiana Britton; Rosaceae) reveal a fragmented species, frozen in place and time
Matt C. Estep, Logan Clark, Kristin Emery, Shravya Sanigepalli, Kathryn Caruso, Adam Morgan, David Greene, Jennifer Rhode Ward
Castanea, 2025
Published
2025
In Plain Language
Virginia spiraea is a rare shrub found along rivers in the southern Appalachians. We studied its genetics and reproduction across scattered populations and found that these populations are deeply isolated — genetically "frozen" with very little gene flow between them. This means each population is essentially on its own evolutionarily, which has major implications for conservation: losing any single population means losing unique genetic diversity that won't be replaced.
conservation population genetics rare species Appalachia

Forest Ecology

Investigating how the loss of foundation tree species cascades through forest ecosystems — from soil fungi to seedling survival.

Assessing the effect of eastern hemlock (Tsuga canadensis) decline from hemlock woolly adelgid (Adelges tsugae) infestation on ectomycorrhizal colonization and growth of red oak (Quercus rubra) seedlings
Kathryn E. Caruso, Jonathan L. Horton, and Alisa A. Hove
Published
2021
In Plain Language
Eastern hemlocks across the Appalachians are dying from an invasive insect called the hemlock woolly adelgid. As hemlocks disappear, forests change — more light reaches the floor, soils warm up, and the fungal communities in the soil shift. I studied whether these changes affect how well red oak seedlings form partnerships with beneficial root fungi (mycorrhizae) and how that influences their growth. Understanding these cascading effects helps us predict what Appalachian forests will look like as they lose one of their most important tree species.
mycorrhizae invasive species forest ecology Appalachia